Healthy seedlingsIf you have started seeds indoors for your garden, you have taken the first step in a great adventure to take full control of what you grow. Many people purchase seedlings in the spring, because they are easier to grow, but the diversity available in seedlings pales in comparison to the vast diversity available in seeds. To an experienced gardener, seeds represent the full range of choices from commercial companies and from the growing number of seed savers offering home-saved seeds.

Seeds want to grow, so they just need the right place to do it.

A warm, well-lit place with good soil and even moisture. A windowsill is a great place to start, and when you need a bit more room a shelf with a light fixture attached above it will give good results. Once you have the watering schedule figured out (not too much, not too little) there is usually just one vexing problem left: what to do with long, spindly seedlings.

All seedlings need light, and despite our best efforts it is really difficult to provide enough in a typical house or apartment. Although the sun looks bright in the window, our eyes adapt so well that we really can't tell that winter sunlight is much more dim than in the summer. Also, the length of the day is still not enough for good seedling growth. The result that you've probably seen are seedlings that stretch and flop over because they're too tall and spindly.

Seedlings grow long, thin stems when they don't have enough light. In nature, they might just be shaded underneath another plant, so they try to grow tall to reach above it. Unfortunately that doesn't help them in your windowsill, so they just grow long, weak stems. Sometimes the fragile stems break, and almost always, the seedlings become difficult to separate and transplant into the garden.

There are two great solutions to this outlined below:

1) Transplant the seedlings to bury the excess stems

2) Prune the seedlings to keep them short.

1. Transplanting Seedlings

When a seedling grows too tall and spindly, it is not very difficult to transplant it into a deeper pot, burying part of the stem. You might have heard that garden plants and especially trees should not be transplanted deeper than they've become accustomed to, which is true for large plants, but seedlings don't mind being buried a few inches deeper. As long as most of the leaves are above ground, this is a good way to get rid of excess stem length and make the seedling "shorter" in the pot. It will be less likely to break and get intertwined with other seedlings, and ultimately it will be easier to transplant into the garden.

As a bonus, some plants such as tomatoes and peppers will grow additional roots out of the sides of the buried stems. That makes a bigger root mass, and a healthier seedling, while making it more compact.

2. Pruning Seedlings

Shrubs, trees, and houseplants all respond in much the same way when their branches are pruned: they produce new growth further down the trunks and stems. Seedlings do the same. You can pinch or cut back your seedlings to make them more compact and bushy, keeping them a manageable size, just as you would do with shrubs.

When a seedling grows, usually all the growth is just at the tip. New leaves grow, then a new section of stem, then leaves, and another section of stem. That linear growth is what makes the seedling long and spindly. If you just pinch off the growth tip, the seedling gets confused about where it should put its energy, so it grows new branches all along the stem. That not only stops it from becoming longer and more fragile, it creates a bushier plant in the garden.

Which method is best?

That depends on the plant. The pruning method works well with zinnias and marigolds whether the seedlings are long or not because it makes a much nicer bushy plant in the garden, with more flowers. When the seedlings reach the five leaf stage, you can chop them off to three leaves. Scissors are good for this.

Pruning may not work as well for tomato seedlings. The reason is that the bushy growth caused by tip-pruning will make a tomato plant with many more side-branches (we call them "suckers") that make the vines difficult to stake and control. Instead, the transplanting method may triumph, burying their stems so that only the leaves show above ground. The underground stems grow more roots, and the aboveground stems grow stocky and well-behaved.

If you've felt discouraged from growing seedlings indoors because they've been long and untamed, try again and experiment with a few ways to keep them compact. There is nothing like seeing seeds sprout in March, and having the unmatched diversity of seeds available to your garden all summer.

See also: Preventing Seedling Damping Off